| Name | City | Grade range |
|---|---|---|
| Belleview Elementary | Sonora | elementary |
| Belleview Elementary Community Day | Sonora | community day |
| Big Oak Flat-Groveland Adult | Groveland | adult education |
| Black Oak Elementary | Twain Harte | elementary |
| Chinese Camp Elementary | Chinese Camp | elementary |
| Cold Springs High | Long Barn | high |
| Columbia Elementary | Columbia | elementary |
| Curtis Creek Elementary | Sonora | elementary |
| Dario Cassina High | Sonora | continuation |
| Don Pedro Community Day | La Grange | community day |
| Don Pedro High | La Grange | high |
| Jamestown Community Day | Jamestown | community day |
| Jamestown Elementary | Jamestown | elementary |
| Long Barn High | Long Barn | continuation |
| Moccasin Community Day | Groveland | community day |
| Mountain High | Pinecrest | high |
| Pinecrest Elementary | Pinecrest | elementary |
| Sierra Community Day | Tuolumne | community day |
| Sonora Elementary | Sonora | elementary |
| Sonora High | Sonora | high |
| Sonora High Community Day | Sonora | community day |
| Soulsbyville Elementary | Soulsbyville | elementary |
| South Fork High | Tuolumne | high |
| Springfield Community Day | Columbia | community day |
| Summerville Elementary | Tuolumne | elementary |
| Summerville High | Tuolumne | high |
| Tenaya Elementary | Groveland | elementary |
| Theodore Bird High | Sonora | alternative |
| Tioga High | Groveland | high |
| Tuolumne County Cal-Safe Program | Sonora | opportunity |
| Tuolumne County Community/Isp | Sonora | county community |
| Tuolumne County Special Education | Sonora | special education |
| Tuolumne County Special Education Preschool | Sonora | preschool |
| Tuolumne High (Continuation) | Tuolumne | continuation |
| Twain Harte Community Day | Twain Harte | community day |
| Twain Harte Middle | Twain Harte | elementary |